Thes Psu

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
%     filename  = "YourName-Dissertation.tex",
%     version   = "1.3.0",
%     date      = "2013/10/21",
%     authors   = "Gary L. Gray,
%     copyright = "Gary L. Gray",
%     address   = "Engineering Science and Mechanics,
%                  212 Earth & Engineering Sciences Bldg.,
%                  Penn State University,
%                  University Park, PA 16802,
%                  USA",
%     telephone = "814-863-1778",
%     email     = "gray@psu.edu",
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% Change History:
%
% 1.3.0	**	Added the cite package.
%
%		**	Give that the Graduate School now allows essentially
%			any line spacing, I have moved the line space setting
%			from psuthesis.cls to this driver file. Go ahead and
%			make it ugly if you want. :-)
%
%		**	Removed \addtocounter{page}{-1} after \psutitlepage is
%			executed. It made the paging of the frontmatter
%			incorrect. I can no longer remember why it was there.
%
%		**	Removed \psusigpage since the Graduate School now
%			provides the signature page.
%
%		**	Added the command \collegesubmittedto to add the College
%			in which the thesis/dissertation has been completed to
%			the title page.
%
%		**	Added instructions for documents that include a single
%			appendix since the Graduate School just hates calling it
%			``Appendix A'' is there is a single appendix.
%
%		**	Removed the fncychap package since I could not easily
%			find a way to make it work with documents that have a
%			single appendix.
%
%		**	Added the titlesec package so that the user can make the
%			format of the chapter titles a little less boring than
%			LaTeX's default.
%
% 1.2.2	**	Added some information to the main driver file (this
%			file) regarding the use of hyperref with the
%			psuthesis class. Thanks to Nathan Urban for pointing
%			out the included workaround.
%
% 1.2.1	**	Finally reproduced and fixed the problem where the
%			page number listed in the TOC for the Bibliography
%			was the last page number of the Bibliography.
%
%		**	Added 10pt and 11pt options to the document class,
%			though we have no idea why anyone would want to use
%			such insanely small font sizes since it will lead to
%			line lengths that are much too long.
%
% 1.2.0	**	Two additional class options have been added to
%			support honors theses submitted to the Schreyer
%			Honors College. These options are:
%			- honors
%			- honorsdepthead
%			See below for details.
%
%		**	We have also added the commands:
%			- honorsdegreeinfo
%			- honorsadviser
%			- honorsdepthead
%			Again, see below for details.
%
% 1.1.2	**	If you want to use the subfigure package with our
%			psuthesis class file, then you must must find the 
%			following line in the psuthesis.cls file:
%
%			\RequirePackage{tocloft}
%
%			and add the subfigure option. We have already set
%			this up for you in the psuthesis.cls file to make
%			this easy to do.
%
% 1.1.1	**	Added the fncychap package to the distribution.
%
% 1.1.0	**	The way that the thesis frontmatter and backmatter
%			is generated has been completely re-done in order
%			to be more intuitive.
%
%		**	We have added the ability to change the title of
%			the Dedication/Epigraph to anything you please.
%
%		**	In the process of changing the format of the Table
%			of Contents to conform to the inflexible rules of
%			the Grad School (the word ``Chapter'' and
%			``Appendix'' need to appear before the number and
%			letter, respectively), we have added an option to
%			the class called inlinechaptertoc that changes the
%			format of the Chapter/Appendix entries in the TOC.
%			Note that the tocloft package is now required.
%
%		**	Appendices should now start with the
%			\Appendix command rather than \chapter. See the
%			accompanying files for examples.
%
%		**	Added information regarding the Nontechnical
%			Abstract that is required of ESM students.
%
%		**	Added the fncychap package for those of you who like
%			the nice Chapter headings it provides. We like
%			Lenny, but you don't have to use it if you don't
%			want to. In addition, the other options are: Sonny,
%			Glenn, Conny, Rejne, and Bjarne
%
% 1.0.4	**	fixed the \addcontentsline entry for BibTeX within
%			the commented out text in the Bibliography section
%
% 1.0.3	**	added a sigpage option to conform to new Grad School
%			requirements
%
% 1.0.2	**	issued the \appendix command to start the appendices
%
%		**	moved the \addcontentsline for the bibliography so
%			that the bibliography now shows up on the right page
%			in the TOC
%
%		**	added some info if you use bibtex
%
% 1.0.1	**	eqlist and eqparbox are now included in the archive
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% This is a template file to help get you started using the
% psuthesis.cls for theses and dissertations at Penn State
% University. You will, of course, need to put the
% psuthesis.cls file someplace that LaTeX will find it.
%
% We have set up a directory structure that we find to be clean
% and convenient. You can readjust it to suit your tastes. In
% fact, the structure used by our students is even a little
% more involved and commands are defined to point to the
% various directories.
%
% This document has been set up to be typeset using pdflatex.
% About the only thing you will need to change if typesetting
% using latex is the \DeclareGraphicsExtensions command.
%
% The psuthesis document class uses the same options as the
% book class. In addition, it requires that you have the
% ifthen, calc, setspace, and tocloft packages.
%
% The first additional option specifies the degree type. You
% can choose from:
%	Ph.D. using class option <phd>
%	M.S. using class option <ms>
%	M.Eng. using class option <meng>
%	M.A. using class option <ma>
%	B.S. using class option <bs>
%	B.A. using class option <ba>
%	Honors Baccalaureate using the option <honors>
%
% If you specify either ba or bs in addition to honors, it will
% just use the honors option and ignore the ba or bs option.
%
% The second additional option <inlinechaptertoc> determines
% the formatting of the Chapter entries in the Table of
% Contents. The default sets them as two-line entries (try it).
% If you want them as one-line entries, issue the
% inlinechaptertoc option.
%
% The class option ``honors'' should be used for theses
% submitted to the Schreyer Honors College. This option
% changes the formatting on the Title page so that the
% signatures appear on the Title page.
%
% The class option ``honorsdepthead'' adds the signature of the
% department head on the Title page for those baccalaureate
% theses that require this.
%
% The class option ``secondthesissupervisor'' should be used
% for baccalaureate honors degrees if you have a second
% Thesis Supervisor.
%
% The vita is only included with the phd option and it is
% placed at the end of the thesis. The permissions page is only
% included with the ms, meng, and ma options.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Only one of the following lines should be used at a time.
%\documentclass[draft,phd,12pt]{psuthesis}
%\documentclass[draft,phd,inlinechaptertoc]{psuthesis}
%\documentclass[draft,ms]{psuthesis}
%\documentclass[draft,honorsdepthead,honors]{psuthesis}
\documentclass[phd,12pt]{psuthesis}
%\documentclass[draft,secondthesissupervisor,honors]{psuthesis}
%\documentclass[draft,bs]{psuthesis}

\usepackage[T1]{fontenc}
\usepackage{lmodern}
\usepackage{textcomp}
\usepackage{microtype}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Packages we like to use. %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\usepackage{amsmath}
\usepackage{amssymb}
%\usepackage{amsthm}
%\usepackage{exscale}
%\usepackage[mathscr]{eucal}
%\usepackage{bm}
\usepackage{eqlist} % Makes for a nice list of symbols.
\usepackage[final]{graphicx}
\usepackage[dvipsnames]{color}
\DeclareGraphicsExtensions{.pdf, .jpg}

% http://www.tex.ac.uk/cgi-bin/texfaq2html?label=citesort
\usepackage{cite}

\usepackage{titlesec}

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Use of the hyperref package %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
% This is optional and is included only for those students
% who want to use it.
%
% To the hyperref package, uncomment the following line:
%\usepackage{hyperref}
%
% Note that you should also uncomment the following line:
%\renewcommand{\theHchapter}{\thepart.\thechapter}
%
% to work around some a problem hyperref has with the fact
% the psuthesis class has unnumbered pages after which page
% counters are reset.

% Set the baselinestretch using the setspace package.
% The LaTeX Companion claims that a \baselinestretch of
% 1.24 gives one-and-a-half line spacing, which is allowed
% by the PSU thesis office. As of October 18, 2013, the Graduate
% School states ``The text of an eTD may be single-, double- or
% one- and-a-half-spaced.'' Go nuts!
\setstretch{1.24}


%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% SPECIAL SYMBOLS AND NEW COMMANDS %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\input{SupplementaryMaterial/UserDefinedCommands}


%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Renewed Float Parameters              %
% (Makes floats fit better on the page) %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\renewcommand{\floatpagefraction}{0.85}
\renewcommand{\topfraction}      {0.85}
\renewcommand{\bottomfraction}   {0.85}
\renewcommand{\textfraction}     {0.15}

% ----------------------------------------------------------- %

%%%%%%%%%%%%%%%%
% FRONT-MATTER %
%%%%%%%%%%%%%%%%
% Title
\title{Thesis Title}

% Author and Department
\author{Your Name}
\dept{Your Department Name}
% the degree will be conferred on this date
\degreedate{May 2013}
% year of your copyright
\copyrightyear{2013}

% This command is used for students submitting a thesis to the
% Schreyer Honors College. The argument of this command should
% contain every after the word ``requirements'' that appears on
% the title page. This provides the needed flexibility for
% all the degree types.
\honorsdegreeinfo{for a baccalaureate degree \\ in Engineering Science \\ with honors in Engineering Science}

% This is the document type. For example, this could also be:
%	Comprehensive Document
%	Thesis Proposal
%\documenttype{Thesis}
\documenttype{Dissertation}
%\documenttype{Comprehensive Document}


% This will generally be The Graduate School, though you can
% put anything in here to suit your needs.
\submittedto{The Graduate School}

% This is the college to in which you are submitting the
% thesis/dissertation.
\collegesubmittedto{College of Engineering}


%%%%%%%%%%%%%%%%%%
% Signatory Page %
%%%%%%%%%%%%%%%%%%
% You can have up to 7 committee members, i.e., one advisor
% and up to 6 readers.
%
% Begin by specifying the number of readers.
\numberofreaders{4}

% For baccalaureate honors degrees, enter the name of your
% honors adviser below.
\honorsadviser{Honors P. Adviser}

% For baccalaureate honors degrees, if you have a second
% Thesis Supervisor, enter his or her name below.
\secondthesissupervisor{Second T. Supervisor}

% For baccalaureate honors degrees, certain departments
% (e.g., Engineering Science and Mechanics) require the
% signature of the department head. In that case, enter the
% name of your department head below.
\honorsdepthead{Department Q. Head}

% Input reader information below. The optional argument, which
% comes first, goes on the second line before the name.
\advisor[Thesis Advisor, Chair of Committee]
		{Joseph H. Blow}
		{Professor of SomeThing}

\readerone[Optional Title Here]
			{Reader Name}
			{Professor of SomeThing}

\readertwo[Optional Title Here]
			{Reader Name}
			{Professor of SomeThing}

\readerthree[Optional Title Here]
			{Reader Name}
			{Professor of SomeThing}

\readerfour[Optional Title Here]
			{Reader Name}
			{Professor of SomeThing}

\readerfive[Optional Title Here]
			{Reader Name}
			{Professor of SomeThing}

% Format the Chapter headings using the titlesec package.
% You can format section headings and the like here too.
\definecolor{gray75}{gray}{0.75}
\newcommand{\hsp}{\hspace{15pt}}
\titleformat{\chapter}[display]{\fontsize{30}{30}\selectfont\bfseries\sffamily}{Chapter \thechapter\hsp\textcolor{gray75}{\raisebox{3pt}{|}}}{0pt}{}{}

\titleformat{\section}[block]{\Large\bfseries\sffamily}{\thesection}{12pt}{}{}
\titleformat{\subsection}[block]{\large\bfseries\sffamily}{\thesubsection}{12pt}{}{}


% Makes use of LaTeX's include facility. Add as many chapters
% and appendices as you like.
\includeonly{%
Chapter-1/Chapter-1,%
Chapter-2/Chapter-2,%
Chapter-3/Chapter-3,%
Chapter-4/Chapter-4,%
Chapter-5/Chapter-5,%
Appendix-A/Appendix-A,%
Appendix-B/Appendix-B,%
Appendix-C/Appendix-C,%
Appendix-D/Appendix-D,%
Appendix-E/Appendix-E%
}

\usepackage{listings}
%%%%%%%%%%%%%%%%%
% THE BEGINNING %
%%%%%%%%%%%%%%%%%
\begin{document}
%%%%%%%%%%%%%%%%%%%%%%%%
% Preliminary Material %
%%%%%%%%%%%%%%%%%%%%%%%%
% This command is needed to properly set up the frontmatter.
\frontmatter

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% IMPORTANT
%
% The following commands allow you to include all the
% frontmatter in your thesis. If you don't need one or more of
% these items, you can comment it out. Most of these items are
% actually required by the Grad School -- see the Thesis Guide
% for details regarding what is and what is not required for
% your particular degree.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% !!! DO NOT CHANGE THE SEQUENCE OF THESE ITEMS !!!
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

% Generates the title page based on info you have provided
% above.
\psutitlepage

% Generates the committee page -- this is bound with your
% thesis. If this is an baccalaureate honors thesis, then
% comment out this line.
\psucommitteepage

% Generates the abstract. The argument should point to the
% file containing your abstract. 
\thesisabstract{SupplementaryMaterial/Abstract}

% Generates the Table of Contents
\thesistableofcontents

% Generates the List of Figures
\thesislistoffigures

% Generates the List of Tables
\thesislistoftables

% Generates the List of Symbols. The argument should point to
% the file containing your List of Symbols. 
\thesislistofsymbols{SupplementaryMaterial/ListOfSymbols}

% Generates the Acknowledgments. The argument should point to
% the file containing your Acknowledgments. 
\thesisacknowledgments{SupplementaryMaterial/Acknowledgments}

% Generates the Epigraph/Dedication. The first argument should
% point to the file containing your Epigraph/Dedication and
% the second argument should be the title of this page. 
\thesisdedication{SupplementaryMaterial/Dedication}{Dedication}



%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% This command is needed to get the main part of the %
% document going.                                    %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\thesismainmatter

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% This is an AMS-LaTeX command to allow breaking %
% of displayed equations across pages. Note the  %
% closing the "}" just before the bibliography.  %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\allowdisplaybreaks{
%\pagestyle{fancy}
%\fancyhead{}
%
%%%%%%%%%%%%%%%%%%%%%%
% THE ACTUAL CONTENT %
%%%%%%%%%%%%%%%%%%%%%%
% Chapters
\include{Chapter-1/Chapter-1}
\include{Chapter-2/Chapter-2}
\include{Chapter-3/Chapter-3}
\include{Chapter-4/Chapter-4}
\include{Chapter-5/Chapter-5}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% Appendices
%
% Because of a quirk in LaTeX (see p. 48 of The LaTeX
% Companion, 2e), you cannot use \include along with
% \addtocontents if you want things to appear the proper
% sequence.
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\appendix
\titleformat{\chapter}[display]{\fontsize{30}{30}\selectfont\bfseries\sffamily}{Appendix \thechapter\textcolor{gray75}{\raisebox{3pt}{|}}}{0pt}{}{}
% If you have a single appendix, then to prevent LaTeX from
% calling it ``Appendix A'', you should uncomment the following two
% lines that redefine the \thechapter and \thesection:
%\renewcommand\thechapter{}
%\renewcommand\thesection{\arabic{section}}
\include{Appendix-A/Appendix-A}
\include{Appendix-B/Appendix-B}
\include{Appendix-C/Appendix-C}
\include{Appendix-D/Appendix-D}
%\include{Appendix-E/Appendix-E}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% ESM students need to include a Nontechnical Abstract as the %
% last appendix.                                              %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
% This \include command should point to the file containing
% that abstract.
%\include{nontechnical-abstract}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
} % End of the \allowdisplaybreak command %
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

%%%%%%%%%%%%%%%%
% BIBLIOGRAPHY %
%%%%%%%%%%%%%%%%
% You can use BibTeX or other bibliography facility for your
% bibliography. LaTeX's standard stuff is shown below. If you
% bibtex, then this section should look something like:
	\begin{singlespace}
	\bibliographystyle{GLG-bibstyle}
	\addcontentsline{toc}{chapter}{Bibliography}
	\bibliography{Biblio-Database}
	\end{singlespace}

%\begin{singlespace}
%\begin{thebibliography}{99}
%\addcontentsline{toc}{chapter}{Bibliography}
%\frenchspacing

%\bibitem{Wisdom87} J. Wisdom, ``Rotational Dynamics of Irregularly Shaped Natural Satellites,'' \emph{The Astronomical Journal}, Vol.~94, No.~5, 1987  pp. 1350--1360.

%\bibitem{G&H83} J. Guckenheimer and P. Holmes, \emph{Nonlinear Oscillations, Dynamical Systems, and Bifurcations of Vector Fields}, Springer-Verlag, New York, 1983.

%\end{thebibliography}
%\end{singlespace}

\backmatter

% Vita
\vita{SupplementaryMaterial/Vita}

\end{document}